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Biology· bioinformatics-agent

Biomni

Stanford · 2025

General biomedical agent with Biomni-Eval: 433 instances across 10 reasoning tasks.

BiologyMedicine
GitHub stars
Task type
agentic
Modality
text
Access
open
Size
433 items
License
Apache-2.0
Metrics
accuracy
instance_id
0
task_instance_id
134
prompt
Your task is to identify the most promising variant associated wtih a given GWAS phenotype for futher examination. From the list, prioritize the top associated variant (matching one of the given variant). GWAS phenotype: Bradykinin Variants: rs7700133, rs1280, rs7651090, rs4253311, rs3738934, rs7385804, rs1367117, rs4808136, rs10087900, rs855791, rs12678919
task_name
gwas_variant_prioritization
split
val
answer
rs4253311
instance_id
1
task_instance_id
178
prompt
Your task is to identify the most promising variant associated wtih a given GWAS phenotype for futher examination. From the list, prioritize the top associated variant (matching one of the given variant). GWAS phenotype: Homocysteine Variants: rs9369898, rs1395, rs662138, rs2011069, rs6742078, rs4939883, rs4503368, rs12550729, rs7529794, rs2100944, rs6678639
task_name
gwas_variant_prioritization
split
val
answer
rs9369898

Real rows from the Hugging Face datasets server · long values truncated